J4_4WF9_007

3D structure

PDB id

4WF9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.43 Å

Loop

Sequence

GACUG*CACAG*UGAC*GUAAC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_61477.5

Basepair signature

cWW-tSW-F-tHS-tHS-F-cWW-cWW-F-tHS-cWW

Number of instances in this motif group

4

Unit IDs

4WF9|1|X|G|1799
4WF9|1|X|A|1800
4WF9|1|X|C|1801
4WF9|1|X|U|1802
4WF9|1|X|G|1803
*
4WF9|1|X|C|1815
4WF9|1|X|A|1816
4WF9|1|X|C|1817
4WF9|1|X|A|1818
4WF9|1|X|G|1819
*
4WF9|1|X|U|1854
4WF9|1|X|G|1855
4WF9|1|X|A|1856
4WF9|1|X|C|1857
*
4WF9|1|X|G|2002
4WF9|1|X|U|2003
4WF9|1|X|A|2004
4WF9|1|X|A|2005
4WF9|1|X|C|2006

Current chains

Chain X

23S ribosomal RNA

Nearby chains

Chain A

50S ribosomal protein L2