J4_4WSM_006
3D structure
- PDB id
- 4WSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Leu and mRNA with G-U mismatch in the first position in the A- and P-sites
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CGAG*CGUAG*CGAG*CGCAAACGGCCCGCACGCGGGCCGAAAAG
- Length
- 42 nucleotides
- Bulged bases
- 4WSM|1|14|A|654, 4WSM|1|14|A|654|||J, 4WSM|1|14|C|654|||K
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4WSM|1|14|C|601
4WSM|1|14|G|602
4WSM|1|14|A|603
4WSM|1|14|G|604
*
4WSM|1|14|C|624
4WSM|1|14|G|625
4WSM|1|14|U|626
4WSM|1|14|A|627
4WSM|1|14|G|628
*
4WSM|1|14|C|635
4WSM|1|14|G|636
4WSM|1|14|A|637
4WSM|1|14|G|638
*
4WSM|1|14|C|650
4WSM|1|14|G|651
4WSM|1|14|C|652
4WSM|1|14|A|653
4WSM|1|14|A|654
4WSM|1|14|A|654|||A
4WSM|1|14|C|654|||B
4WSM|1|14|G|654|||C
4WSM|1|14|G|654|||D
4WSM|1|14|C|654|||E
4WSM|1|14|C|654|||F
4WSM|1|14|C|654|||G
4WSM|1|14|G|654|||H
4WSM|1|14|C|654|||I
4WSM|1|14|A|654|||J
4WSM|1|14|C|654|||K
4WSM|1|14|G|654|||L
4WSM|1|14|C|654|||M
4WSM|1|14|G|654|||N
4WSM|1|14|G|654|||O
4WSM|1|14|G|654|||P
4WSM|1|14|C|654|||Q
4WSM|1|14|C|654|||R
4WSM|1|14|G|654|||S
4WSM|1|14|A|654|||T
4WSM|1|14|A|654|||U
4WSM|1|14|A|654|||V
4WSM|1|14|A|655
4WSM|1|14|G|656
Current chains
- Chain 14
- 23S ribosomal RNA
Nearby chains
- Chain 35
- 50S ribosomal protein L15
- Chain 39
- 50S ribosomal protein L4
- Chain M5
- 50S ribosomal protein L35
Coloring options: