J4_4ZSN_027

3D structure

PDB id

4ZSN (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S-wild-type HigB toxin complex bound to a AAA lysine codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CAAAGG*CCUGAC*GGG*CGG

Length

18 nucleotides

Bulged bases

4ZSN|1|YA|A|2288, 4ZSN|1|YA|G|2382

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4ZSN|1|YA|C|2285
4ZSN|1|YA|A|2286
4ZSN|1|YA|A|2287
4ZSN|1|YA|A|2288
4ZSN|1|YA|G|2289
4ZSN|1|YA|G|2290
*
4ZSN|1|YA|C|2342
4ZSN|1|YA|C|2343
4ZSN|1|YA|U|2344
4ZSN|1|YA|G|2345
4ZSN|1|YA|A|2346
4ZSN|1|YA|C|2347
*
4ZSN|1|YA|G|2370
4ZSN|1|YA|G|2371
4ZSN|1|YA|G|2372
*
4ZSN|1|YA|C|2381
4ZSN|1|YA|G|2382
4ZSN|1|YA|G|2383

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y0

50S ribosomal protein L27

Chain Y6

50S ribosomal protein L33

Chain Y8

50S ribosomal protein L35

Chain YS

50S ribosomal protein L18