J4_5AA0_004
3D structure
- PDB id
- 5AA0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of Thermous thermophilus ribosome (A-and P-site tRNA) bound to BipA-GDPCP
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5 Å
Loop
- Sequence
- GGGUU*GUUAG*CU*ACCCGUACC
- Length
- 21 nucleotides
- Bulged bases
- 5AA0|1|AA|G|1311||||P_1, 5AA0|1|AA|U|1341||||P_1
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5AA0|1|AA|G|1309||||P_1
5AA0|1|AA|G|1310||||P_1
5AA0|1|AA|G|1311||||P_1
5AA0|1|AA|U|1312||||P_1
5AA0|1|AA|U|1313||||P_1
*
5AA0|1|AA|G|1339||||P_1
5AA0|1|AA|U|1340||||P_1
5AA0|1|AA|U|1341||||P_1
5AA0|1|AA|A|1342||||P_1
5AA0|1|AA|G|1343||||P_1
*
5AA0|1|AA|C|1404||||P_1
5AA0|1|AA|U|1405||||P_1
*
5AA0|1|AA|A|1597||||P_1
5AA0|1|AA|C|1598||||P_1
5AA0|1|AA|C|1599||||P_1
5AA0|1|AA|C|1600||||P_1
5AA0|1|AA|G|1601||||P_1
5AA0|1|AA|U|1602||||P_1
5AA0|1|AA|A|1603||||P_1
5AA0|1|AA|C|1604||||P_1
5AA0|1|AA|C|1605||||P_1
Current chains
- Chain AA
- 23S ribosomal RNA
Nearby chains
- Chain AU
- 50S ribosomal protein L23
- Chain Ad
- 50S ribosomal protein L34
Coloring options: