J4_5ADY_001

3D structure

PDB id

5ADY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of the 50S ribosome subunit bound with HflX

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

CC*GAGUAG*UGAAUAUGG*CCAAG

Length

22 nucleotides

Bulged bases

5ADY|1|B|U|405

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5ADY|1|B|C|268
5ADY|1|B|C|269
*
5ADY|1|B|G|370
5ADY|1|B|A|371
5ADY|1|B|G|372
5ADY|1|B|U|373
5ADY|1|B|A|374
5ADY|1|B|G|375
*
5ADY|1|B|U|399
5ADY|1|B|G|400
5ADY|1|B|A|401
5ADY|1|B|A|402
5ADY|1|B|U|403
5ADY|1|B|A|404
5ADY|1|B|U|405
5ADY|1|B|G|406
5ADY|1|B|G|407
*
5ADY|1|B|C|420
5ADY|1|B|C|421
5ADY|1|B|A|422
5ADY|1|B|A|423
5ADY|1|B|G|424

Current chains

Chain B

23S RRNA

Nearby chains

Chain H

50S RIBOSOMAL PROTEIN L9

Chain X

50S RIBOSOMAL PROTEIN L28