J4_5ADY_002

3D structure

PDB id

5ADY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of the 50S ribosome subunit bound with HflX

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

GGAAGC*GCGCG*CAG*CGUAC

Length

19 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5ADY|1|B|G|297
5ADY|1|B|G|298
5ADY|1|B|A|299
5ADY|1|B|A|300
5ADY|1|B|G|301
5ADY|1|B|C|302
*
5ADY|1|B|G|315
5ADY|1|B|C|316
5ADY|1|B|G|317
5ADY|1|B|C|318
5ADY|1|B|G|319
*
5ADY|1|B|C|323
5ADY|1|B|A|324
5ADY|1|B|G|325
*
5ADY|1|B|C|337
5ADY|1|B|G|338
5ADY|1|B|U|339
5ADY|1|B|A|340
5ADY|1|B|C|341

Current chains

Chain B

23S RRNA

Nearby chains

Chain E

50S RIBOSOMAL PROTEIN L4

Chain U

50S RIBOSOMAL PROTEIN L24