J4_5ADY_008
3D structure
- PDB id
- 5ADY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of the 50S ribosome subunit bound with HflX
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- CUGCCCGG*CGGCG*CCUAAGGUAG*CGAAUG
- Length
- 29 nucleotides
- Bulged bases
- 5ADY|1|B|C|1838, 5ADY|1|B|U|1971
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5ADY|1|B|C|1833
5ADY|1|B|U|1834
5ADY|1|B|G|1835
5ADY|1|B|C|1836
5ADY|1|B|C|1837
5ADY|1|B|C|1838
5ADY|1|B|G|1839
5ADY|1|B|G|1840
*
5ADY|1|B|C|1902
5ADY|1|B|G|1903
5ADY|1|B|G|1904
5ADY|1|B|C|1905
5ADY|1|B|G|1906
*
5ADY|1|B|C|1924
5ADY|1|B|C|1925
5ADY|1|B|U|1926
5ADY|1|B|A|1927
5ADY|1|B|A|1928
5ADY|1|B|G|1929
5ADY|1|B|G|1930
5ADY|1|B|U|1931
5ADY|1|B|A|1932
5ADY|1|B|G|1933
*
5ADY|1|B|C|1967
5ADY|1|B|G|1968
5ADY|1|B|A|1969
5ADY|1|B|A|1970
5ADY|1|B|U|1971
5ADY|1|B|G|1972
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain 6
- GTPASE HFLX
- Chain C
- 50S RIBOSOMAL PROTEIN L2
Coloring options: