J4_5AJ3_002
3D structure
- PDB id
- 5AJ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the small subunit of the mammalian mitoribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GAGAAUG*CAG*CUUG*CC
- Length
- 16 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5AJ3|1|A|G|71
5AJ3|1|A|A|72
5AJ3|1|A|G|73
5AJ3|1|A|A|74
5AJ3|1|A|A|75
5AJ3|1|A|U|76
5AJ3|1|A|G|77
*
5AJ3|1|A|C|106
5AJ3|1|A|A|107
5AJ3|1|A|G|108
*
5AJ3|1|A|C|144
5AJ3|1|A|U|145
5AJ3|1|A|U|146
5AJ3|1|A|G|147
*
5AJ3|1|A|C|153
5AJ3|1|A|C|154
Current chains
- Chain A
- MITORIBOSOMAL 12S RRNA
Nearby chains
- Chain L
- MITORIBOSOMAL PROTEIN US12M, MRPS12
- Chain P
- MITORIBOSOMAL PROTEIN BS16M, MRPS16
- Chain Q
- MITORIBOSOMAL PROTEIN US17M, MRPS17
- Chain j
- MITORIBOSOMAL PROTEIN MS34, MRPS34
Coloring options: