J4_5AJ4_008

3D structure

PDB id

5AJ4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 55S mammalian mitoribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

AAA*UG*CAG*CAU

Length

11 nucleotides

Bulged bases

5AJ4|1|BA|A|1502

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5AJ4|1|BA|A|1444
5AJ4|1|BA|A|1445
5AJ4|1|BA|A|1446
*
5AJ4|1|BA|U|1476
5AJ4|1|BA|G|1477
*
5AJ4|1|BA|C|1501
5AJ4|1|BA|A|1502
5AJ4|1|BA|G|1503
*
5AJ4|1|BA|C|1539
5AJ4|1|BA|A|1540
5AJ4|1|BA|U|1541

Current chains

Chain BA

MITORIBOSOMAL 16S Ribosomal RNA

Nearby chains

Chain BE

MITORIBOSOMAL PROTEIN UL3M, MRPL3

Chain BN

MITORIBOSOMAL PROTEIN UL13M, MRPL13

Chain BO

MITORIBOSOMAL PROTEIN UL14M, MRPL14