J4_5E7K_022

3D structure

PDB id

5E7K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GGGGGAC*GC*GG*CCCCCC

Length

17 nucleotides

Bulged bases

5E7K|1|1H|A|1444|||A

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5E7K|1|1H|G|1440
5E7K|1|1H|G|1441
5E7K|1|1H|G|1442
5E7K|1|1H|G|1443
5E7K|1|1H|G|1444
5E7K|1|1H|A|1444|||A
5E7K|1|1H|C|1445
*
5E7K|1|1H|G|1466
5E7K|1|1H|C|1467
*
5E7K|1|1H|G|1525
5E7K|1|1H|G|1526
*
5E7K|1|1H|C|1546
5E7K|1|1H|C|1547
5E7K|1|1H|C|1548
5E7K|1|1H|C|1549
5E7K|1|1H|C|1550
5E7K|1|1H|C|1551

Current chains

Chain 1H

23S rRNA

Nearby chains