J4_5E7K_031
3D structure
- PDB id
- 5E7K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- UUAG*CAG*UUGGUCG*CA
- Length
- 16 nucleotides
- Bulged bases
- 5E7K|1|3L|U|8, 5E7K|1|3L|U|47, 5E7K|1|3L|C|48
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_70449.28
- Basepair signature
- cWW-F-cWW-cWW-cHS-F-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
5E7K|1|3L|U|7
5E7K|1|3L|U|8
5E7K|1|3L|A|9
5E7K|1|3L|G|10
*
5E7K|1|3L|C|25
5E7K|1|3L|A|26
5E7K|1|3L|G|27
*
5E7K|1|3L|U|43
5E7K|1|3L|U|44
5E7K|1|3L|G|45
5E7K|1|3L|G|46
5E7K|1|3L|U|47
5E7K|1|3L|C|48
5E7K|1|3L|G|49
*
5E7K|1|3L|C|65
5E7K|1|3L|A|66
Current chains
- Chain 3L
- tRNALys
Nearby chains
- Chain 2A
- 30S ribosomal protein S11
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