J4_5EL7_022

3D structure

PDB id

5EL7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

GGAC*GC*GG*CCC

Length

11 nucleotides

Bulged bases

5EL7|1|1H|A|1444|||A

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5EL7|1|1H|G|1443
5EL7|1|1H|G|1444
5EL7|1|1H|A|1444|||A
5EL7|1|1H|C|1445
*
5EL7|1|1H|G|1466
5EL7|1|1H|C|1467
*
5EL7|1|1H|G|1525
5EL7|1|1H|G|1526
*
5EL7|1|1H|C|1546
5EL7|1|1H|C|1547
5EL7|1|1H|C|1548

Current chains

Chain 1H

23S rRNA

Nearby chains