J4_5FCI_020

3D structure

PDB id

5FCI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the vacant uL3 W255C mutant 80S yeast ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CUAAG*UUG*CC*GUG

Length

13 nucleotides

Bulged bases

5FCI|1|5|A|2657

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5FCI|1|5|C|2654
5FCI|1|5|U|2655
5FCI|1|5|A|2656
5FCI|1|5|A|2657
5FCI|1|5|G|2658
*
5FCI|1|5|U|2712
5FCI|1|5|U|2713
5FCI|1|5|G|2714
*
5FCI|1|5|C|2741
5FCI|1|5|C|2742
*
5FCI|1|5|G|2751
5FCI|1|5|U|2752
5FCI|1|5|G|2753

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain l5

60S ribosomal protein L5

Chain n1

60S ribosomal protein L21-A

Chain q2

60S ribosomal protein L42-A

Chain sM

Suppressor protein STM1,Suppressor protein STM1