3D structure

PDB id
5J7L (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
GAGUAAUG*UG*CUAG*CC
Length
16 nucleotides
Bulged bases
5J7L|1|AA|U|121
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J4_35578.3
Basepair signature
cWW-F-cWW-F-F-F-tHW-F-cWW-cWW
Number of instances in this motif group
2

Unit IDs

5J7L|1|AA|G|115
5J7L|1|AA|A|116
5J7L|1|AA|G|117
5J7L|1|AA|U|118
5J7L|1|AA|A|119
5J7L|1|AA|A|120
5J7L|1|AA|U|121
5J7L|1|AA|G|122
*
5J7L|1|AA|U|239
5J7L|1|AA|G|240
*
5J7L|1|AA|C|286
5J7L|1|AA|U|287
5J7L|1|AA|A|288
5J7L|1|AA|G|289
*
5J7L|1|AA|C|311
5J7L|1|AA|C|312

Current chains

Chain AA
16S rRNA

Nearby chains

Chain AP
30S ribosomal protein S16
Chain AQ
30S ribosomal protein S17

Coloring options:

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