J4_5J7L_002

3D structure

PDB id

5J7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

5J7L|1|AA|C|183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_01665.1

Basepair signature

cWW-tWH-F-tWH-cWW-tSS-F-tHW-tSS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

5J7L|1|AA|G|142
5J7L|1|AA|A|143
5J7L|1|AA|G|144
*
5J7L|1|AA|C|178
5J7L|1|AA|A|179
5J7L|1|AA|U|180
5J7L|1|AA|A|181
5J7L|1|AA|A|182
5J7L|1|AA|C|183
5J7L|1|AA|G|184
*
5J7L|1|AA|C|193
5J7L|1|AA|C|194
5J7L|1|AA|A|195
5J7L|1|AA|A|196
5J7L|1|AA|A|197
5J7L|1|AA|G|198
*
5J7L|1|AA|U|219
5J7L|1|AA|G|220
5J7L|1|AA|C|221

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AT

30S ribosomal protein S20