J4_5KCS_009
3D structure
- PDB id
- 5KCS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CGAAG*UUGAC*GGUG*CAGG
- Length
- 18 nucleotides
- Bulged bases
- 5KCS|1|1A|A|2288
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5KCS|1|1A|C|2285
5KCS|1|1A|G|2286
5KCS|1|1A|A|2287
5KCS|1|1A|A|2288
5KCS|1|1A|G|2289
*
5KCS|1|1A|U|2343
5KCS|1|1A|U|2344
5KCS|1|1A|G|2345
5KCS|1|1A|A|2346
5KCS|1|1A|C|2347
*
5KCS|1|1A|G|2370
5KCS|1|1A|G|2371
5KCS|1|1A|U|2372
5KCS|1|1A|G|2373
*
5KCS|1|1A|C|2380
5KCS|1|1A|A|2381
5KCS|1|1A|G|2382
5KCS|1|1A|G|2383
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 10
- 50S ribosomal protein L27
- Chain 16
- 50S ribosomal protein L33
- Chain 18
- 50S ribosomal protein L35
- Chain 1S
- 50S ribosomal protein L18
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