J4_5LZS_005
3D structure
- PDB id
- 5LZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.31 Å
Loop
- Sequence
- CC*GAGGGAG*UGCGCCGCGCUCU*GAGCGCACGGGG
- Length
- 34 nucleotides
- Bulged bases
- 5LZS|1|5|G|959, 5LZS|1|5|C|972, 5LZS|1|5|C|1280
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5LZS|1|5|C|712
5LZS|1|5|C|713
*
5LZS|1|5|G|955
5LZS|1|5|A|956
5LZS|1|5|G|957
5LZS|1|5|G|958
5LZS|1|5|G|959
5LZS|1|5|A|960
5LZS|1|5|G|961
*
5LZS|1|5|U|971
5LZS|1|5|G|971|||A
5LZS|1|5|C|972
5LZS|1|5|G|973
5LZS|1|5|C|974
5LZS|1|5|C|975
5LZS|1|5|G|976
5LZS|1|5|C|977
5LZS|1|5|G|978
5LZS|1|5|C|979
5LZS|1|5|U|980
5LZS|1|5|C|981
5LZS|1|5|U|982
*
5LZS|1|5|G|1273
5LZS|1|5|A|1274
5LZS|1|5|G|1275
5LZS|1|5|C|1276
5LZS|1|5|G|1277
5LZS|1|5|C|1278
5LZS|1|5|A|1279
5LZS|1|5|C|1280
5LZS|1|5|G|1281
5LZS|1|5|G|1282
5LZS|1|5|G|1283
5LZS|1|5|G|1284
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain C
- uL4
- Chain E
- 60S ribosomal protein L6
- Chain F
- uL30
- Chain b
- eL29
- Chain e
- eL32
Coloring options: