J4_5LZV_010

3D structure

PDB id

5LZV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian ribosomal termination complex with accommodated eRF1(AAQ) and ABCE1.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.35 Å

Loop

Sequence

CUAAGG*CUUG*CC*GGG

Length

15 nucleotides

Bulged bases

5LZV|1|5|A|4234

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZV|1|5|C|4231
5LZV|1|5|U|4232
5LZV|1|5|A|4233
5LZV|1|5|A|4234
5LZV|1|5|G|4235
5LZV|1|5|G|4236
*
5LZV|1|5|C|4288
5LZV|1|5|U|4289
5LZV|1|5|U|4290
5LZV|1|5|G|4291
*
5LZV|1|5|C|4318
5LZV|1|5|C|4319
*
5LZV|1|5|G|4328
5LZV|1|5|G|4329
5LZV|1|5|G|4330

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain D

uL18

Chain T

eL21

Chain o

eL42