J4_5LZX_007

3D structure

PDB id

5LZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a UGA stop codon.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.67 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

5LZX|1|5|A|2696

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZX|1|5|G|2618
5LZX|1|5|G|2619
*
5LZX|1|5|U|2637
5LZX|1|5|G|2638
5LZX|1|5|U|2639
5LZX|1|5|G|2640
5LZX|1|5|A|2641
5LZX|1|5|A|2642
*
5LZX|1|5|U|2692
5LZX|1|5|G|2693
5LZX|1|5|G|2694
5LZX|1|5|A|2695
5LZX|1|5|A|2696
5LZX|1|5|A|2697
5LZX|1|5|G|2698
*
5LZX|1|5|U|2718
5LZX|1|5|C|2719

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain R

eL19

Chain U

eL22

Chain g

eL34

Chain k

eL38