J4_5LZZ_008

3D structure

PDB id

5LZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian rescue complex with Pelota and Hbs1l (combined)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.47 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

5LZZ|1|5|A|2696

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZZ|1|5|G|2618
5LZZ|1|5|G|2619
*
5LZZ|1|5|U|2637
5LZZ|1|5|G|2638
5LZZ|1|5|U|2639
5LZZ|1|5|G|2640
5LZZ|1|5|A|2641
5LZZ|1|5|A|2642
*
5LZZ|1|5|U|2692
5LZZ|1|5|G|2693
5LZZ|1|5|G|2694
5LZZ|1|5|A|2695
5LZZ|1|5|A|2696
5LZZ|1|5|A|2697
5LZZ|1|5|G|2698
*
5LZZ|1|5|U|2718
5LZZ|1|5|C|2719

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain R

eL19

Chain U

eL22

Chain g

eL34

Chain k

eL38