J4_5MRE_004

3D structure

PDB id

5MRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

GGUU*AAAA*UA*UACCGUAAU

Length

19 nucleotides

Bulged bases

5MRE|1|A|U|1342, 5MRE|1|A|A|1352

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MRE|1|A|G|1340
5MRE|1|A|G|1341
5MRE|1|A|U|1342
5MRE|1|A|U|1343
*
5MRE|1|A|A|1351
5MRE|1|A|A|1352
5MRE|1|A|A|1353
5MRE|1|A|A|1354
*
5MRE|1|A|U|1410
5MRE|1|A|A|1411
*
5MRE|1|A|U|1549
5MRE|1|A|A|1550
5MRE|1|A|C|1551
5MRE|1|A|C|1552
5MRE|1|A|G|1553
5MRE|1|A|U|1554
5MRE|1|A|A|1555
5MRE|1|A|A|1556
5MRE|1|A|U|1557

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain 3

mL41

Chain P

uL23m

Chain Y

bL34m

Chain d

mL67