J4_5MRF_005

3D structure

PDB id

5MRF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class C

Experimental method

ELECTRON MICROSCOPY

Resolution

4.97 Å

Loop

Sequence

AACUG*CACCG*UGAACU*ACGUAAU

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MRF|1|A|A|1679
5MRF|1|A|A|1680
5MRF|1|A|C|1681
5MRF|1|A|U|1682
5MRF|1|A|G|1683
*
5MRF|1|A|C|1695
5MRF|1|A|A|1696
5MRF|1|A|C|1697
5MRF|1|A|C|1698
5MRF|1|A|G|1699
*
5MRF|1|A|U|1735
5MRF|1|A|G|1736
5MRF|1|A|A|1737
5MRF|1|A|A|1738
5MRF|1|A|C|1739
5MRF|1|A|U|1740
*
5MRF|1|A|A|1873
5MRF|1|A|C|1874
5MRF|1|A|G|1875
5MRF|1|A|U|1876
5MRF|1|A|A|1877
5MRF|1|A|A|1878
5MRF|1|A|U|1879

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain 11

mS38

Chain B

uL2m

Chain aa

Small subunit ribosomal RNA; SSU rRNA