J4_5OA3_008

3D structure

PDB id

5OA3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 40S-eIF2D-re-initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

GAAC*GA*UUG*CC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5OA3|1|3|G|153
5OA3|1|3|A|154
5OA3|1|3|A|155
5OA3|1|3|C|156
*
5OA3|1|3|G|171
5OA3|1|3|A|172
*
5OA3|1|3|U|227
5OA3|1|3|U|228
5OA3|1|3|G|229
*
5OA3|1|3|C|238
5OA3|1|3|C|239

Current chains

Chain 3

IRES mRNA

Nearby chains

Chain H

40S ribosomal protein S7

Chain b

40S ribosomal protein S27