J4_5OOL_002
3D structure
- PDB id
- 5OOL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.06 Å
Loop
- Sequence
- UAAGCCUGCG*CAAUUAAC*GUCAACC*GCA
- Length
- 28 nucleotides
- Bulged bases
- 5OOL|1|A|U|2372, 5OOL|1|A|A|2374
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5OOL|1|A|U|2336
5OOL|1|A|A|2337
5OOL|1|A|A|2338
5OOL|1|A|G|2339
5OOL|1|A|C|2340
5OOL|1|A|C|2341
5OOL|1|A|U|2342
5OOL|1|A|G|2343
5OOL|1|A|C|2344
5OOL|1|A|G|2345
*
5OOL|1|A|C|2368
5OOL|1|A|A|2369
5OOL|1|A|A|2370
5OOL|1|A|U|2371
5OOL|1|A|U|2372
5OOL|1|A|A|2373
5OOL|1|A|A|2374
5OOL|1|A|C|2375
*
5OOL|1|A|G|2421
5OOL|1|A|U|2422
5OOL|1|A|C|2423
5OOL|1|A|A|2424
5OOL|1|A|A|2425
5OOL|1|A|C|2426
5OOL|1|A|C|2427
*
5OOL|1|A|G|2436
5OOL|1|A|C|2437
5OOL|1|A|A|2438
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain 2
- 39S ribosomal protein L34, mitochondrial
- Chain 9
- 39S ribosomal protein L41, mitochondrial
- Chain U
- 39S ribosomal protein L23, mitochondrial
- Chain Y
- 39S ribosomal protein L47, mitochondrial
- Chain d
- 39S ribosomal protein L45, mitochondrial
- Chain s
- 39S ribosomal protein S30, mitochondrial
Coloring options: