J4_5OOL_003

3D structure

PDB id

5OOL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.06 Å

Loop

Sequence

GCCUG*CAUCAC*GCACCG*CUCCAC

Length

23 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5OOL|1|A|G|2492
5OOL|1|A|C|2493
5OOL|1|A|C|2494
5OOL|1|A|U|2495
5OOL|1|A|G|2496
*
5OOL|1|A|C|2508
5OOL|1|A|A|2509
5OOL|1|A|U|2510
5OOL|1|A|C|2511
5OOL|1|A|A|2512
5OOL|1|A|C|2513
*
5OOL|1|A|G|2537
5OOL|1|A|C|2538
5OOL|1|A|A|2539
5OOL|1|A|C|2540
5OOL|1|A|C|2541
5OOL|1|A|G|2542
*
5OOL|1|A|C|2637
5OOL|1|A|U|2638
5OOL|1|A|C|2639
5OOL|1|A|C|2640
5OOL|1|A|A|2641
5OOL|1|A|C|2642

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain D

39S ribosomal protein L2, mitochondrial