J4_5T7V_008

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CCUGCCCAG*CGGCG*CCUAAGGUAG*CGAAAGG

Length

31 nucleotides

Bulged bases

5T7V|1|B|C|1865, 5T7V|1|B|A|1998

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T7V|1|B|C|1859
5T7V|1|B|C|1860
5T7V|1|B|U|1861
5T7V|1|B|G|1862
5T7V|1|B|C|1863
5T7V|1|B|C|1864
5T7V|1|B|C|1865
5T7V|1|B|A|1866
5T7V|1|B|G|1867
*
5T7V|1|B|C|1929
5T7V|1|B|G|1930
5T7V|1|B|G|1931
5T7V|1|B|C|1932
5T7V|1|B|G|1933
*
5T7V|1|B|C|1951
5T7V|1|B|C|1952
5T7V|1|B|U|1953
5T7V|1|B|A|1954
5T7V|1|B|A|1955
5T7V|1|B|G|1956
5T7V|1|B|G|1957
5T7V|1|B|U|1958
5T7V|1|B|A|1959
5T7V|1|B|G|1960
*
5T7V|1|B|C|1994
5T7V|1|B|G|1995
5T7V|1|B|A|1996
5T7V|1|B|A|1997
5T7V|1|B|A|1998
5T7V|1|B|G|1999
5T7V|1|B|G|2000

Current chains

Chain B

23S ribosomal RNA

Nearby chains

Chain A

Small subunit ribosomal RNA; SSU rRNA

Chain L2

50S ribosomal protein L2