J4_5T7V_013

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUGGA*UACAAUG*CUCAGUUC*GCUGGAAUC

Length

29 nucleotides

Bulged bases

5T7V|1|A|U|1250, 5T7V|1|A|U|1312

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T7V|1|A|G|951
5T7V|1|A|U|952
5T7V|1|A|G|953
5T7V|1|A|G|954
5T7V|1|A|A|955
*
5T7V|1|A|U|1245
5T7V|1|A|A|1246
5T7V|1|A|C|1247
5T7V|1|A|A|1248
5T7V|1|A|A|1249
5T7V|1|A|U|1250
5T7V|1|A|G|1251
*
5T7V|1|A|C|1306
5T7V|1|A|U|1307
5T7V|1|A|C|1308
5T7V|1|A|A|1309
5T7V|1|A|G|1310
5T7V|1|A|U|1311
5T7V|1|A|U|1312
5T7V|1|A|C|1313
*
5T7V|1|A|G|1344
5T7V|1|A|C|1345
5T7V|1|A|U|1346
5T7V|1|A|G|1347
5T7V|1|A|G|1348
5T7V|1|A|A|1349
5T7V|1|A|A|1350
5T7V|1|A|U|1351
5T7V|1|A|C|1352

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain D

Transfer RNA; tRNA