J4_5V93_002

3D structure

PDB id

5V93 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome from Mycobacterium tuberculosis bound with Capreomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CAAGG*CCGCAGCGAAAGCGAG*CGACCCAC*GUGAAUAG

Length

37 nucleotides

Bulged bases

5V93|1|A|A|756, 5V93|1|A|C|759

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5V93|1|A|C|704
5V93|1|A|A|705
5V93|1|A|A|706
5V93|1|A|G|707
5V93|1|A|G|708
*
5V93|1|A|C|727
5V93|1|A|C|728
5V93|1|A|G|729
5V93|1|A|C|730
5V93|1|A|A|731
5V93|1|A|G|732
5V93|1|A|C|733
5V93|1|A|G|734
5V93|1|A|A|735
5V93|1|A|A|736
5V93|1|A|A|737
5V93|1|A|G|738
5V93|1|A|C|739
5V93|1|A|G|740
5V93|1|A|A|741
5V93|1|A|G|742
*
5V93|1|A|C|754
5V93|1|A|G|755
5V93|1|A|A|756
5V93|1|A|C|757
5V93|1|A|C|758
5V93|1|A|C|759
5V93|1|A|A|760
5V93|1|A|C|761
*
5V93|1|A|G|778
5V93|1|A|U|779
5V93|1|A|G|780
5V93|1|A|A|781
5V93|1|A|A|782
5V93|1|A|U|783
5V93|1|A|A|784
5V93|1|A|G|785

Current chains

Chain A

23S rRNA

Nearby chains

Chain 3

50S ribosomal protein L35

Chain E

50S ribosomal protein L4

Chain L

50S ribosomal protein L15