J4_5V93_009

3D structure

PDB id

5V93 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome from Mycobacterium tuberculosis bound with Capreomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

AAACC*GAC*GUCA*UUCU

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5V93|1|A|A|2880
5V93|1|A|A|2881
5V93|1|A|A|2882
5V93|1|A|C|2883
5V93|1|A|C|2884
*
5V93|1|A|G|2912
5V93|1|A|A|2913
5V93|1|A|C|2914
*
5V93|1|A|G|2970
5V93|1|A|U|2971
5V93|1|A|C|2972
5V93|1|A|A|2973
*
5V93|1|A|U|3007
5V93|1|A|U|3008
5V93|1|A|C|3009
5V93|1|A|U|3010

Current chains

Chain A

23S rRNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain J

50S ribosomal protein L13

Chain K

50S ribosomal protein L14