J4_5WDT_004

3D structure

PDB id

5WDT (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GppNHp

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGUUC*GGUGAG*CUU*AAAUCGUAC

Length

23 nucleotides

Bulged bases

5WDT|1|A|G|1341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WDT|1|A|G|1310
5WDT|1|A|G|1311
5WDT|1|A|U|1312
5WDT|1|A|U|1313
5WDT|1|A|C|1314
*
5WDT|1|A|G|1338
5WDT|1|A|G|1339
5WDT|1|A|U|1340
5WDT|1|A|G|1341
5WDT|1|A|A|1342
5WDT|1|A|G|1343
*
5WDT|1|A|C|1404
5WDT|1|A|U|1405
5WDT|1|A|U|1406
*
5WDT|1|A|A|1596
5WDT|1|A|A|1597
5WDT|1|A|A|1598
5WDT|1|A|U|1599
5WDT|1|A|C|1600
5WDT|1|A|G|1601
5WDT|1|A|U|1602
5WDT|1|A|A|1603
5WDT|1|A|C|1604

Current chains

Chain A

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain T

50S ribosomal protein L23