J4_5WE6_018

3D structure

PDB id

5WE6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and cognate tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GAGGG*CGCAUAACG*CCAAAG*UGC

Length

23 nucleotides

Bulged bases

5WE6|1|a|C|183, 5WE6|1|a|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WE6|1|a|G|142
5WE6|1|a|A|143
5WE6|1|a|G|144
5WE6|1|a|G|145
5WE6|1|a|G|146
*
5WE6|1|a|C|176
5WE6|1|a|G|177
5WE6|1|a|C|178
5WE6|1|a|A|179
5WE6|1|a|U|180
5WE6|1|a|A|181
5WE6|1|a|A|182
5WE6|1|a|C|183
5WE6|1|a|G|184
*
5WE6|1|a|C|193
5WE6|1|a|C|194
5WE6|1|a|A|195
5WE6|1|a|A|196
5WE6|1|a|A|197
5WE6|1|a|G|198
*
5WE6|1|a|U|219
5WE6|1|a|G|220
5WE6|1|a|C|221

Current chains

Chain a

16S rRNA

Nearby chains

Chain t

30S ribosomal protein S20