J4_5WF0_012

3D structure

PDB id

5WF0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGAG*CAUAACG*CCAAAG*UGCC

Length

21 nucleotides

Bulged bases

5WF0|1|a|C|183, 5WF0|1|a|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WF0|1|a|G|141
5WF0|1|a|G|142
5WF0|1|a|A|143
5WF0|1|a|G|144
*
5WF0|1|a|C|178
5WF0|1|a|A|179
5WF0|1|a|U|180
5WF0|1|a|A|181
5WF0|1|a|A|182
5WF0|1|a|C|183
5WF0|1|a|G|184
*
5WF0|1|a|C|193
5WF0|1|a|C|194
5WF0|1|a|A|195
5WF0|1|a|A|196
5WF0|1|a|A|197
5WF0|1|a|G|198
*
5WF0|1|a|U|219
5WF0|1|a|G|220
5WF0|1|a|C|221
5WF0|1|a|C|222

Current chains

Chain a

16S rRNA

Nearby chains

Chain t

30S ribosomal protein S20