J4_5WFK_012

3D structure

PDB id

5WFK (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GAGUAAUGUC*GAUG*CUAG*CC

Length

20 nucleotides

Bulged bases

5WFK|1|a|U|121

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WFK|1|a|G|115
5WFK|1|a|A|116
5WFK|1|a|G|117
5WFK|1|a|U|118
5WFK|1|a|A|119
5WFK|1|a|A|120
5WFK|1|a|U|121
5WFK|1|a|G|122
5WFK|1|a|U|123
5WFK|1|a|C|124
*
5WFK|1|a|G|237
5WFK|1|a|A|238
5WFK|1|a|U|239
5WFK|1|a|G|240
*
5WFK|1|a|C|286
5WFK|1|a|U|287
5WFK|1|a|A|288
5WFK|1|a|G|289
*
5WFK|1|a|C|311
5WFK|1|a|C|312

Current chains

Chain a

16S rRNA

Nearby chains

Chain p

30S ribosomal protein S16

Chain q

30S ribosomal protein S17