J4_5WFK_013

3D structure

PDB id

5WFK (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AUGGAG*CAUAACG*CCAAAG*UGCCAU

Length

25 nucleotides

Bulged bases

5WFK|1|a|C|183, 5WFK|1|a|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WFK|1|a|A|139
5WFK|1|a|U|140
5WFK|1|a|G|141
5WFK|1|a|G|142
5WFK|1|a|A|143
5WFK|1|a|G|144
*
5WFK|1|a|C|178
5WFK|1|a|A|179
5WFK|1|a|U|180
5WFK|1|a|A|181
5WFK|1|a|A|182
5WFK|1|a|C|183
5WFK|1|a|G|184
*
5WFK|1|a|C|193
5WFK|1|a|C|194
5WFK|1|a|A|195
5WFK|1|a|A|196
5WFK|1|a|A|197
5WFK|1|a|G|198
*
5WFK|1|a|U|219
5WFK|1|a|G|220
5WFK|1|a|C|221
5WFK|1|a|C|222
5WFK|1|a|A|223
5WFK|1|a|U|224

Current chains

Chain a

16S rRNA

Nearby chains

Chain t

30S ribosomal protein S20