J4_5ZET_001

3D structure

PDB id

5ZET (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis P/P state 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUAAAC*GGGUUG*CUG*UAAG

Length

19 nucleotides

Bulged bases

5ZET|1|A|U|316, 5ZET|1|A|U|493

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5ZET|1|A|C|269
5ZET|1|A|U|270
5ZET|1|A|A|271
5ZET|1|A|A|272
5ZET|1|A|A|273
5ZET|1|A|C|274
*
5ZET|1|A|G|312
5ZET|1|A|G|313
5ZET|1|A|G|314
5ZET|1|A|U|315
5ZET|1|A|U|316
5ZET|1|A|G|317
*
5ZET|1|A|C|492
5ZET|1|A|U|493
5ZET|1|A|G|494
*
5ZET|1|A|U|509
5ZET|1|A|A|510
5ZET|1|A|A|511
5ZET|1|A|G|512

Current chains

Chain A

23S rRNA

Nearby chains

Chain H

50S ribosomal protein L9