J4_5ZEU_001

3D structure

PDB id

5ZEU (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis P/P state 30S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GAGUAACAC*GGC*GUAG*CC

Length

18 nucleotides

Bulged bases

5ZEU|1|a|C|117

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5ZEU|1|a|G|111
5ZEU|1|a|A|112
5ZEU|1|a|G|113
5ZEU|1|a|U|114
5ZEU|1|a|A|115
5ZEU|1|a|A|116
5ZEU|1|a|C|117
5ZEU|1|a|A|118
5ZEU|1|a|C|119
*
5ZEU|1|a|G|238
5ZEU|1|a|G|239
5ZEU|1|a|C|240
*
5ZEU|1|a|G|286
5ZEU|1|a|U|287
5ZEU|1|a|A|288
5ZEU|1|a|G|289
*
5ZEU|1|a|C|311
5ZEU|1|a|C|312

Current chains

Chain a

16S rRNA

Nearby chains

Chain p

30S ribosomal protein S16

Chain q

30S ribosomal protein S17