Loop J4_6AH3

3D structure

PDB id: 6AH3 (explore in PDB, NAKB, or RNA 3D Hub)
Description: Cryo-EM structure of yeast Ribonuclease P with pre-tRNA substrate
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.48 Å

Loop

Sequence: GGAACACAGUG*CGUUUG*CUGUUGAGUGCAAUCGUAGGAC*GAACCCGAU
Length: 48 nucleotides
Bulged bases: 6AH3|1|A|A|101, 6AH3|1|A|C|102, 6AH3|1|A|C|104, 6AH3|1|A|U|268, 6AH3|1|A|U|304, 6AH3|1|A|G|305, 6AH3|1|A|U|306, 6AH3|1|A|G|308, 6AH3|1|A|C|313, 6AH3|1|A|A|314, 6AH3|1|A|C|342
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

6AH3|1|A|G|98
6AH3|1|A|G|99
6AH3|1|A|A|100
6AH3|1|A|A|101
6AH3|1|A|C|102
6AH3|1|A|A|103
6AH3|1|A|C|104
6AH3|1|A|A|105
6AH3|1|A|G|106
6AH3|1|A|U|107
6AH3|1|A|G|108
*
6AH3|1|A|C|264
6AH3|1|A|G|265
6AH3|1|A|U|266
6AH3|1|A|U|267
6AH3|1|A|U|268
6AH3|1|A|G|269
*
6AH3|1|A|C|303
6AH3|1|A|U|304
6AH3|1|A|G|305
6AH3|1|A|U|306
6AH3|1|A|U|307
6AH3|1|A|G|308
6AH3|1|A|A|309
6AH3|1|A|G|310
6AH3|1|A|U|311
6AH3|1|A|G|312
6AH3|1|A|C|313
6AH3|1|A|A|314
6AH3|1|A|A|315
6AH3|1|A|U|316
6AH3|1|A|C|317
6AH3|1|A|G|318
6AH3|1|A|U|319
6AH3|1|A|A|320
6AH3|1|A|G|321
6AH3|1|A|G|322
6AH3|1|A|A|323
6AH3|1|A|C|324
*
6AH3|1|A|G|337
6AH3|1|A|A|338
6AH3|1|A|A|339
6AH3|1|A|C|340
6AH3|1|A|C|341
6AH3|1|A|C|342
6AH3|1|A|G|343
6AH3|1|A|A|344
6AH3|1|A|U|345

Current chains

Chain A: Ribonuclease P RNA

Nearby chains

Chain B: Ribonucleases P/MRP protein subunit POP1
Chain E: Ribonuclease P/MRP protein subunit POP5
Chain G: Ribonucleases P/MRP protein subunit POP7
Chain H: Ribonucleases P/MRP protein subunit POP8
Chain I: Ribonuclease P/MRP protein subunit RPP1
Chain J: Ribonuclease P/MRP protein subunit RPP1
Chain T: Transfer RNA; tRNA

J4_6AH3_001