J4_6BOK_006
3D structure
- PDB id
- 6BOK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.55 Å
Loop
- Sequence
- CGAG*CGUAG*CGAG*CGUCUAG
- Length
- 20 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_6BOK_006 not in the Motif Atlas
- Homologous match to J4_5J7L_020
- Geometric discrepancy: 0.5239
- The information below is about J4_5J7L_020
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_60168.1
- Basepair signature
- cWW-F-F-F-F-F-cWW-F-F-F-cWW-F-tSS-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
6BOK|1|B|C|601
6BOK|1|B|G|602
6BOK|1|B|A|603
6BOK|1|B|G|604
*
6BOK|1|B|C|624
6BOK|1|B|G|625
6BOK|1|B|U|626
6BOK|1|B|A|627
6BOK|1|B|G|628
*
6BOK|1|B|C|635
6BOK|1|B|G|636
6BOK|1|B|A|637
6BOK|1|B|G|638
*
6BOK|1|B|C|650
6BOK|1|B|G|651
6BOK|1|B|U|652
6BOK|1|B|C|653
6BOK|1|B|U|654
6BOK|1|B|A|655
6BOK|1|B|G|656
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain FA
- 50S ribosomal protein L35
- Chain G
- 50S ribosomal protein L4
- Chain M
- 50S ribosomal protein L15
Coloring options: