3D structure

PDB id
6CFL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Thermus thermophilus 70S ribosome in complex with lysyl-CAM and bound to protein Y (YfiA) at 2.6A resolution
Experimental method
X-RAY DIFFRACTION
Resolution
2.6 Å

Loop

Sequence
GGAC*GC*GG*CCC
Length
11 nucleotides
Bulged bases
6CFL|1|2A|A|1445
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6CFL|1|2A|G|1443
6CFL|1|2A|G|1444
6CFL|1|2A|A|1445
6CFL|1|2A|C|1445|||A
*
6CFL|1|2A|G|1466
6CFL|1|2A|C|1467
*
6CFL|1|2A|G|1525
6CFL|1|2A|G|1526
*
6CFL|1|2A|C|1546
6CFL|1|2A|C|1547
6CFL|1|2A|C|1548

Current chains

Chain 2A
23S Ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:

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