J4_6DZI_001

3D structure

PDB id

6DZI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.46 Å

Loop

Sequence

CUAAAC*GGGUUG*CUG*UAAG

Length

19 nucleotides

Bulged bases

6DZI|1|A|U|493

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6DZI|1|A|C|269
6DZI|1|A|U|270
6DZI|1|A|A|271
6DZI|1|A|A|272
6DZI|1|A|A|273
6DZI|1|A|C|274
*
6DZI|1|A|G|312
6DZI|1|A|G|313
6DZI|1|A|G|314
6DZI|1|A|U|315
6DZI|1|A|U|316
6DZI|1|A|G|317
*
6DZI|1|A|C|492
6DZI|1|A|U|493
6DZI|1|A|G|494
*
6DZI|1|A|U|509
6DZI|1|A|A|510
6DZI|1|A|A|511
6DZI|1|A|G|512

Current chains

Chain A

23 S rRNA (3119-MER)

Nearby chains

Chain H

50S ribosomal protein L9

Chain y

50S ribosomal protein L28