J4_6DZI_011

3D structure

PDB id

6DZI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.46 Å

Loop

Sequence

GAGUAACAC*GGC*GUAG*CC

Length

18 nucleotides

Bulged bases

6DZI|1|h|C|117

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6DZI|1|h|G|111
6DZI|1|h|A|112
6DZI|1|h|G|113
6DZI|1|h|U|114
6DZI|1|h|A|115
6DZI|1|h|A|116
6DZI|1|h|C|117
6DZI|1|h|A|118
6DZI|1|h|C|119
*
6DZI|1|h|G|238
6DZI|1|h|G|239
6DZI|1|h|C|240
*
6DZI|1|h|G|286
6DZI|1|h|U|287
6DZI|1|h|A|288
6DZI|1|h|G|289
*
6DZI|1|h|C|311
6DZI|1|h|C|312

Current chains

Chain h

16S rRNA

Nearby chains

Chain 5

30S ribosomal protein S17

Chain z

30S ribosomal protein S16