J4_6DZP_006

3D structure

PDB id

6DZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of Mycobacterium smegmatis C(minus) 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.42 Å

Loop

Sequence

GUAC*GGGU*GCAUAG*CGAAUUC

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6DZP|1|A|G|1664
6DZP|1|A|U|1665
6DZP|1|A|A|1666
6DZP|1|A|C|1667
*
6DZP|1|A|G|1686
6DZP|1|A|G|1687
6DZP|1|A|G|1688
6DZP|1|A|U|1689
*
6DZP|1|A|G|1746
6DZP|1|A|C|1747
6DZP|1|A|A|1748
6DZP|1|A|U|1749
6DZP|1|A|A|1750
6DZP|1|A|G|1751
*
6DZP|1|A|C|1762
6DZP|1|A|G|1763
6DZP|1|A|A|1764
6DZP|1|A|A|1765
6DZP|1|A|U|1766
6DZP|1|A|U|1767
6DZP|1|A|C|1768

Current chains

Chain A

23S rRNA

Nearby chains