J4_6FTI_004
3D structure
- PDB id
- 6FTI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Programmed 80S Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- UCUC*GCCGG*CCACGCGCGC*GGCGGAGCGA
- Length
- 29 nucleotides
- Bulged bases
- 6FTI|1|u|C|1237, 6FTI|1|u|G|1244
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6FTI|1|u|U|980
6FTI|1|u|C|981
6FTI|1|u|U|982
6FTI|1|u|C|983
*
6FTI|1|u|G|1070
6FTI|1|u|C|1071
6FTI|1|u|C|1072
6FTI|1|u|G|1073
6FTI|1|u|G|1074
*
6FTI|1|u|C|1236
6FTI|1|u|C|1237
6FTI|1|u|A|1238
6FTI|1|u|C|1239
6FTI|1|u|G|1240
6FTI|1|u|C|1241
6FTI|1|u|G|1242
6FTI|1|u|C|1243
6FTI|1|u|G|1244
6FTI|1|u|C|1245
*
6FTI|1|u|G|1265
6FTI|1|u|G|1266
6FTI|1|u|C|1267
6FTI|1|u|G|1268
6FTI|1|u|G|1269
6FTI|1|u|A|1270
6FTI|1|u|G|1271
6FTI|1|u|C|1272
6FTI|1|u|G|1273
6FTI|1|u|A|1274
Current chains
- Chain u
- 28S rRNA
Nearby chains
- Chain C
- Ribosomal protein L4
- Chain E
- 60S ribosomal protein L6
- Chain F
- uL30
Coloring options: