J4_6FTJ_003
3D structure
- PDB id
- 6FTJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Non-programmed 80S Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- UCUC*GCCGG*CCACGCGCGC*GGCGGAGCGA
- Length
- 29 nucleotides
- Bulged bases
- 6FTJ|1|u|C|1237, 6FTJ|1|u|G|1244
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6FTJ|1|u|U|980
6FTJ|1|u|C|981
6FTJ|1|u|U|982
6FTJ|1|u|C|983
*
6FTJ|1|u|G|1070
6FTJ|1|u|C|1071
6FTJ|1|u|C|1072
6FTJ|1|u|G|1073
6FTJ|1|u|G|1074
*
6FTJ|1|u|C|1236
6FTJ|1|u|C|1237
6FTJ|1|u|A|1238
6FTJ|1|u|C|1239
6FTJ|1|u|G|1240
6FTJ|1|u|C|1241
6FTJ|1|u|G|1242
6FTJ|1|u|C|1243
6FTJ|1|u|G|1244
6FTJ|1|u|C|1245
*
6FTJ|1|u|G|1265
6FTJ|1|u|G|1266
6FTJ|1|u|C|1267
6FTJ|1|u|G|1268
6FTJ|1|u|G|1269
6FTJ|1|u|A|1270
6FTJ|1|u|G|1271
6FTJ|1|u|C|1272
6FTJ|1|u|G|1273
6FTJ|1|u|A|1274
Current chains
- Chain u
- 28S rRNA
Nearby chains
- Chain C
- Ribosomal protein L4
- Chain E
- 60S ribosomal protein L6
- Chain F
- Ul30
Coloring options: