J4_6FTJ_006

3D structure

PDB id

6FTJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Non-programmed 80S Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

6FTJ|1|u|A|2696

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FTJ|1|u|G|2618
6FTJ|1|u|G|2619
*
6FTJ|1|u|U|2637
6FTJ|1|u|G|2638
6FTJ|1|u|U|2639
6FTJ|1|u|G|2640
6FTJ|1|u|A|2641
6FTJ|1|u|A|2642
*
6FTJ|1|u|U|2692
6FTJ|1|u|G|2693
6FTJ|1|u|G|2694
6FTJ|1|u|A|2695
6FTJ|1|u|A|2696
6FTJ|1|u|A|2697
6FTJ|1|u|G|2698
*
6FTJ|1|u|U|2718
6FTJ|1|u|C|2719

Current chains

Chain u

28S rRNA

Nearby chains

Chain R

eL19

Chain U

Ribosomal protein L22

Chain g

eL34

Chain k

eL38