J4_6GC6_001
3D structure
- PDB id
- 6GC6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S ribosomal subunit assembly intermediate state 2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.3 Å
Loop
- Sequence
- GCCCUG*CGAUAGUGAACCAGUAC*GGAAAGGCGAAAAG*CC
- Length
- 39 nucleotides
- Bulged bases
- 6GC6|1|A|U|34, 6GC6|1|A|U|448, 6GC6|1|A|C|456
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GC6|1|A|G|30
6GC6|1|A|C|31
6GC6|1|A|C|32
6GC6|1|A|C|33
6GC6|1|A|U|34
6GC6|1|A|G|35
*
6GC6|1|A|C|445
6GC6|1|A|G|446
6GC6|1|A|A|447
6GC6|1|A|U|448
6GC6|1|A|A|449
6GC6|1|A|G|450
6GC6|1|A|U|451
6GC6|1|A|G|452
6GC6|1|A|A|453
6GC6|1|A|A|454
6GC6|1|A|C|455
6GC6|1|A|C|456
6GC6|1|A|A|457
6GC6|1|A|G|458
6GC6|1|A|U|459
6GC6|1|A|A|460
6GC6|1|A|C|461
*
6GC6|1|A|G|468
6GC6|1|A|G|469
6GC6|1|A|A|470
6GC6|1|A|A|471
6GC6|1|A|A|472
6GC6|1|A|G|473
6GC6|1|A|G|474
6GC6|1|A|C|475
6GC6|1|A|G|476
6GC6|1|A|A|477
6GC6|1|A|A|478
6GC6|1|A|A|479
6GC6|1|A|A|480
6GC6|1|A|G|481
*
6GC6|1|A|C|509
6GC6|1|A|C|510
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 2
- 50S ribosomal protein L34
- Chain E
- 50S ribosomal protein L4
- Chain Q
- 50S ribosomal protein L20
- Chain T
- 50S ribosomal protein L23
- Chain U
- 50S ribosomal protein L24
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