J4_6GSK_022

3D structure

PDB id

6GSK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNAThr in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.36 Å

Loop

Sequence

GGAC*GC*GG*CCC

Length

11 nucleotides

Bulged bases

6GSK|1|1H|A|1444|||A

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GSK|1|1H|G|1443
6GSK|1|1H|G|1444
6GSK|1|1H|A|1444|||A
6GSK|1|1H|C|1445
*
6GSK|1|1H|G|1466
6GSK|1|1H|C|1467
*
6GSK|1|1H|G|1525
6GSK|1|1H|G|1526
*
6GSK|1|1H|C|1546
6GSK|1|1H|C|1547
6GSK|1|1H|C|1548

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains