J4_6GSK_023
3D structure
- PDB id
- 6GSK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNAThr in the A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.36 Å
Loop
- Sequence
- GCAAGUUGG*UG*CCGCAGUGAACAGG*CGC
- Length
- 28 nucleotides
- Bulged bases
- 6GSK|1|1H|G|1758, 6GSK|1|1H|G|1763
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GSK|1|1H|G|1674
6GSK|1|1H|C|1675
6GSK|1|1H|A|1676
6GSK|1|1H|A|1677
6GSK|1|1H|G|1678
6GSK|1|1H|U|1679
6GSK|1|1H|U|1680
6GSK|1|1H|G|1681
6GSK|1|1H|G|1682
*
6GSK|1|1H|U|1706
6GSK|1|1H|G|1707
*
6GSK|1|1H|C|1751
6GSK|1|1H|C|1752
6GSK|1|1H|G|1753
6GSK|1|1H|C|1754
6GSK|1|1H|A|1755
6GSK|1|1H|G|1756
6GSK|1|1H|U|1757
6GSK|1|1H|G|1758
6GSK|1|1H|A|1759
6GSK|1|1H|A|1760
6GSK|1|1H|C|1761
6GSK|1|1H|A|1762
6GSK|1|1H|G|1763
6GSK|1|1H|G|1764
*
6GSK|1|1H|C|1988
6GSK|1|1H|G|1989
6GSK|1|1H|C|1990
Current chains
- Chain 1H
- 23S ribosomal RNA
Nearby chains
- Chain 13
- Small subunit ribosomal RNA; SSU rRNA
- Chain 21
- 50S ribosomal protein L3
- Chain 68
- 50S ribosomal protein L14
- Chain B8
- 50S ribosomal protein L19
Coloring options: