J4_6GXO_004
3D structure
- PDB id
- 6GXO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and P/E-tRNA (State IV)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CGAUAAAG*CUC*GCUU*AG
- Length
- 17 nucleotides
- Bulged bases
- 6GXO|1|A|G|1271, 6GXO|1|A|A|1272, 6GXO|1|A|U|1273, 6GXO|1|A|A|1275, 6GXO|1|A|U|1647
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GXO|1|A|C|1270
6GXO|1|A|G|1271
6GXO|1|A|A|1272
6GXO|1|A|U|1273
6GXO|1|A|A|1274
6GXO|1|A|A|1275
6GXO|1|A|A|1276
6GXO|1|A|G|1277
*
6GXO|1|A|C|1293
6GXO|1|A|U|1294
6GXO|1|A|C|1295
*
6GXO|1|A|G|1645
6GXO|1|A|C|1646
6GXO|1|A|U|1647
6GXO|1|A|U|1648
*
6GXO|1|A|A|2009
6GXO|1|A|G|2010
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L32
- Chain N
- 50S ribosomal protein L17
- Chain S
- 50S ribosomal protein L22
Coloring options: