J4_6GXO_015
3D structure
- PDB id
- 6GXO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and P/E-tRNA (State IV)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GUGG*CGU*AAGAUCGU*GCC
- Length
- 18 nucleotides
- Bulged bases
- 6GXO|1|x|U|8, 6GXO|1|x|A|45, 6GXO|1|x|U|48, 6GXO|1|x|C|49
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GXO|1|x|G|7
6GXO|1|x|U|8
6GXO|1|x|G|9
6GXO|1|x|G|10
*
6GXO|1|x|C|26
6GXO|1|x|G|27
6GXO|1|x|U|28
*
6GXO|1|x|A|44
6GXO|1|x|A|45
6GXO|1|x|G|46
6GXO|1|x|A|47
6GXO|1|x|U|48
6GXO|1|x|C|49
6GXO|1|x|G|50
6GXO|1|x|U|51
*
6GXO|1|x|G|65
6GXO|1|x|C|66
6GXO|1|x|C|67
Current chains
- Chain x
- fMet-tRNA
Nearby chains
- Chain 1
- 50S ribosomal protein L33
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
- Chain m
- 30S ribosomal protein S13
Coloring options: